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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10794671 chr1:121168242 A/C NBPF14 chr1:148003642-148025863:- 0.29 6.44 3.58E-10 Box Plot
BLCA rs10795499 chr10:6834605 G/C IQGAP2 chr5:75699074-76003957:+ -0.49 -6.21 1.41E-9 Box Plot
BLCA rs10807009 chr6:26560620 C/T ZNF322B chr9:99957633-99961910:- 0.47 8.29 1.88E-15 Box Plot
BLCA rs10808484 chr8:117679204 A/G JARID2 chr6:15246527-15522271:+ 0.38 6.48 2.81E-10 Box Plot
BLCA rs10809571 chr9:1181441 C/T C9orf123 chr9:7796493-7799799:- 0.73 6.68 8.28E-11 Box Plot
BLCA rs10809571 chr9:1181441 C/T KIAA0020 chr9:2720469-2844241:- 0.64 6.52 2.28E-10 Box Plot
BLCA rs10809571 chr9:1181441 C/T RANBP6 chr9:6011043-6015625:- 0.67 6.18 1.65E-9 Box Plot
BLCA rs10809571 chr9:1181441 C/T RCL1 chr9:4792869-4885917:+ 0.74 6.65 1.04E-10 Box Plot
BLCA rs10809914 chr9:13199305 A/G KIAA0020 chr9:2720469-2844241:- 0.77 6.35 5.95E-10 Box Plot
BLCA rs10809914 chr9:13199305 A/G PSIP1 chr9:15464064-15511017:- 0.68 6.29 8.77E-10 Box Plot
BLCA rs10809914 chr9:13199305 A/G ZDHHC21 chr9:14611069-14693469:- 0.7 6.17 1.76E-9 Box Plot
BLCA rs10814410 chr9:46587 A/G WASH5P chr19:60951-71626:- 0.31 7.26 2.14E-12 Box Plot
BLCA rs10824973 chr10:51807210 T/C FAM21B chr10:47894023-47949412:+ 0.41 6.17 1.78E-9 Box Plot
BLCA rs10824974 chr10:51807214 G/A FAM21B chr10:47894023-47949412:+ 0.41 6.17 1.78E-9 Box Plot
BLCA rs10857579 chr10:49684998 A/G LY6D chr8:143866296-143868008:- 0.38 6.21 1.37E-9 Box Plot